Comparison of the thiol-dependent antioxidant systems in the ectomycorrhizal Laccaria bicolor and the saprotrophic Phanerochaete chrysosporium.
Identifieur interne : 000C17 ( Main/Exploration ); précédent : 000C16; suivant : 000C18Comparison of the thiol-dependent antioxidant systems in the ectomycorrhizal Laccaria bicolor and the saprotrophic Phanerochaete chrysosporium.
Auteurs : Mélanie Morel [France] ; Annegret Kohler ; Francis Martin ; Eric Gelhaye ; Nicolas RouhierSource :
- The New phytologist [ 1469-8137 ] ; 2008.
Descripteurs français
- KwdFr :
- Analyse de profil d'expression de gènes (MeSH), Analyse de séquence de protéine (MeSH), Antioxydants (métabolisme), Espèces réactives de l'oxygène (métabolisme), Gènes de plante (MeSH), Génome fongique (MeSH), Laccaria (génétique), Laccaria (métabolisme), Modèles génétiques (MeSH), Mycorhizes (génétique), Mycorhizes (métabolisme), Phanerochaete (génétique), Phanerochaete (métabolisme), Phylogenèse (MeSH), Protéines fongiques (génétique), Protéines fongiques (métabolisme), Réducteurs (métabolisme), Thiols (métabolisme).
- MESH :
- génétique : Laccaria, Mycorhizes, Phanerochaete, Protéines fongiques.
- métabolisme : Antioxydants, Espèces réactives de l'oxygène, Laccaria, Mycorhizes, Phanerochaete, Protéines fongiques, Réducteurs, Thiols.
- Analyse de profil d'expression de gènes, Analyse de séquence de protéine, Gènes de plante, Génome fongique, Modèles génétiques, Phylogenèse.
English descriptors
- KwdEn :
- Antioxidants (metabolism), Fungal Proteins (genetics), Fungal Proteins (metabolism), Gene Expression Profiling (MeSH), Genes, Plant (MeSH), Genome, Fungal (MeSH), Laccaria (genetics), Laccaria (metabolism), Models, Genetic (MeSH), Mycorrhizae (genetics), Mycorrhizae (metabolism), Phanerochaete (genetics), Phanerochaete (metabolism), Phylogeny (MeSH), Reactive Oxygen Species (metabolism), Reducing Agents (metabolism), Sequence Analysis, Protein (MeSH), Sulfhydryl Compounds (metabolism).
- MESH :
- chemical , genetics : Fungal Proteins.
- chemical , metabolism : Antioxidants, Fungal Proteins, Reactive Oxygen Species, Reducing Agents, Sulfhydryl Compounds.
- genetics : Laccaria, Mycorrhizae, Phanerochaete.
- metabolism : Laccaria, Mycorrhizae, Phanerochaete.
- Gene Expression Profiling, Genes, Plant, Genome, Fungal, Models, Genetic, Phylogeny, Sequence Analysis, Protein.
Abstract
Sequencing of the Laccaria bicolor and Phanerochaete chrysosporium genomes, together with the availability of many fungal genomes, allow careful comparison to be made of these two basidiomycetes, which possess a different way of life (either symbiotic or saprophytic), with other fungi. Central to the antioxidant systems are superoxide dismutases, catalases and thiol-dependent peroxidases (Tpx). The two reducing systems (thioredoxin (Trx) and glutathione/glutaredoxin (Grx)) are of particular importance against oxidative insults, both for detoxification, through the regeneration of thiol-peroxidases, and for developmental, physiological and signalling processes. Among those thiol-dependent antioxidant systems, special emphasis is given to the redoxin and methionine sulfoxide reductase (Msr) multigenic families. The genes coding for these enzymes were identified in the L. bicolor and P. chrysosporium genomes, were correctly annotated, and the gene content, organization and distribution were compared with other fungi. Expression of the Laccaria genes was also compiled from microarray data. A complete classification, based essentially on gene structure, on phylogenetic and sequence analysis, and on existing experimental data, was proposed. Comparison of the gene content of fungi from all phyla did not show huge differences for multigenic families in the reactive oxygen species (ROS) detoxification network, although some protein subgroups were absent in some fungi.
DOI: 10.1111/j.1469-8137.2008.02498.x
PubMed: 18513221
Affiliations:
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Central to the antioxidant systems are superoxide dismutases, catalases and thiol-dependent peroxidases (Tpx). The two reducing systems (thioredoxin (Trx) and glutathione/glutaredoxin (Grx)) are of particular importance against oxidative insults, both for detoxification, through the regeneration of thiol-peroxidases, and for developmental, physiological and signalling processes. Among those thiol-dependent antioxidant systems, special emphasis is given to the redoxin and methionine sulfoxide reductase (Msr) multigenic families. The genes coding for these enzymes were identified in the L. bicolor and P. chrysosporium genomes, were correctly annotated, and the gene content, organization and distribution were compared with other fungi. Expression of the Laccaria genes was also compiled from microarray data. A complete classification, based essentially on gene structure, on phylogenetic and sequence analysis, and on existing experimental data, was proposed. Comparison of the gene content of fungi from all phyla did not show huge differences for multigenic families in the reactive oxygen species (ROS) detoxification network, although some protein subgroups were absent in some fungi.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">18513221</PMID><DateCompleted><Year>2009</Year><Month>03</Month><Day>03</Day></DateCompleted><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1469-8137</ISSN><JournalIssue CitedMedium="Internet"><Volume>180</Volume><Issue>2</Issue><PubDate><Year>2008</Year></PubDate></JournalIssue><Title>The New phytologist</Title><ISOAbbreviation>New Phytol</ISOAbbreviation></Journal><ArticleTitle>Comparison of the thiol-dependent antioxidant systems in the ectomycorrhizal Laccaria bicolor and the saprotrophic Phanerochaete chrysosporium.</ArticleTitle><Pagination><MedlinePgn>391-407</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/j.1469-8137.2008.02498.x</ELocationID><Abstract><AbstractText>Sequencing of the Laccaria bicolor and Phanerochaete chrysosporium genomes, together with the availability of many fungal genomes, allow careful comparison to be made of these two basidiomycetes, which possess a different way of life (either symbiotic or saprophytic), with other fungi. Central to the antioxidant systems are superoxide dismutases, catalases and thiol-dependent peroxidases (Tpx). The two reducing systems (thioredoxin (Trx) and glutathione/glutaredoxin (Grx)) are of particular importance against oxidative insults, both for detoxification, through the regeneration of thiol-peroxidases, and for developmental, physiological and signalling processes. Among those thiol-dependent antioxidant systems, special emphasis is given to the redoxin and methionine sulfoxide reductase (Msr) multigenic families. The genes coding for these enzymes were identified in the L. bicolor and P. chrysosporium genomes, were correctly annotated, and the gene content, organization and distribution were compared with other fungi. Expression of the Laccaria genes was also compiled from microarray data. A complete classification, based essentially on gene structure, on phylogenetic and sequence analysis, and on existing experimental data, was proposed. Comparison of the gene content of fungi from all phyla did not show huge differences for multigenic families in the reactive oxygen species (ROS) detoxification network, although some protein subgroups were absent in some fungi.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Morel</LastName><ForeName>Mélanie</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Unité Mixte de Recherches 1136 Interactions Arbres/Microorganismes INRA/Nancy Université, IFR 110 Génomique Ecologie et Ecophysiologie Fonctionnelles, Faculté des Sciences BP 239, 54506 Vandoeuvre-lès-Nancy Cedex, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kohler</LastName><ForeName>Annegret</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Martin</LastName><ForeName>Francis</ForeName><Initials>F</Initials></Author><Author ValidYN="Y"><LastName>Gelhaye</LastName><ForeName>Eric</ForeName><Initials>E</Initials></Author><Author ValidYN="Y"><LastName>Rouhier</LastName><ForeName>Nicolas</ForeName><Initials>N</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D003160">Comparative Study</PublicationType><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2008</Year><Month>05</Month><Day>28</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>New Phytol</MedlineTA><NlmUniqueID>9882884</NlmUniqueID><ISSNLinking>0028-646X</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D000975">Antioxidants</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005656">Fungal 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Annegret" uniqKey="Kohler A" first="Annegret" last="Kohler">Annegret Kohler</name><name sortKey="Martin, Francis" sort="Martin, Francis" uniqKey="Martin F" first="Francis" last="Martin">Francis Martin</name><name sortKey="Rouhier, Nicolas" sort="Rouhier, Nicolas" uniqKey="Rouhier N" first="Nicolas" last="Rouhier">Nicolas Rouhier</name></noCountry><country name="France"><region name="Grand Est"><name sortKey="Morel, Melanie" sort="Morel, Melanie" uniqKey="Morel M" first="Mélanie" last="Morel">Mélanie Morel</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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